Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO39Q8N4B4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
FBXO39Q8N4B4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO39Q8N4B4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AC104417.2-201ENST00000562989 1793 ntBASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AC113347.1-201ENST00000413321 391 ntBASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 FITM1-202ENST00000559294 800 ntBASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.94■□□□□ 0.62
FBXO39Q8N4B4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 AL137013.1-201ENST00000432946 1228 ntBASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 KRT18P57-201ENST00000443599 1254 ntBASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 SDHAP1-207ENST00000440850 2000 ntBASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FBXO39Q8N4B4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 KRT18P16-201ENST00000510337 1294 ntBASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.92■□□□□ 0.62
FBXO39Q8N4B4 AL049812.1-201ENST00000432563 2267 ntBASIC18.91■□□□□ 0.62
FBXO39Q8N4B4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms