Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DEPDC4Q8N2C3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 AC092368.3-202ENST00000574180 1591 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 UNC93B5-201ENST00000530315 699 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 AC079416.2-201ENST00000625035 1193 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 AC018470.1-201ENST00000624790 3129 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 ZNF815P-204ENST00000434898 1737 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 AL354751.1-201ENST00000412768 1863 ntBASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DEPDC4Q8N2C3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 AC026366.1-201ENST00000488803 879 ntBASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.62■□□□□ 0.41
DEPDC4Q8N2C3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 AP003097.1-201ENST00000530657 1135 ntBASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 C2orf69P4-201ENST00000565394 541 ntBASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 AC018553.1-201ENST00000616682 1458 ntBASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DEPDC4Q8N2C3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.6■□□□□ 0.41
DEPDC4Q8N2C3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms