Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SCML4Q8N228 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.71■□□□□ 0.75
SCML4Q8N228 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SCML4Q8N228 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.71■□□□□ 0.75
SCML4Q8N228 AC005521.1-201ENST00000393351 872 ntBASIC19.71■□□□□ 0.75
SCML4Q8N228 AL137013.1-201ENST00000432946 1228 ntBASIC19.71■□□□□ 0.75
SCML4Q8N228 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.71■□□□□ 0.75
SCML4Q8N228 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.71■□□□□ 0.75
SCML4Q8N228 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 CR769767.2-201ENST00000622735 460 ntBASIC19.71■□□□□ 0.75
SCML4Q8N228 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
SCML4Q8N228 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 RCC2P3-201ENST00000418112 1537 ntBASIC19.71■□□□□ 0.75
SCML4Q8N228 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCML4Q8N228 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.71■□□□□ 0.75
SCML4Q8N228 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SCML4Q8N228 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.7■□□□□ 0.74
SCML4Q8N228 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.7■□□□□ 0.74
SCML4Q8N228 KRT8P45-201ENST00000414328 1447 ntBASIC19.7■□□□□ 0.74
SCML4Q8N228 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 RCN1P1-201ENST00000400413 996 ntBASIC19.7■□□□□ 0.74
SCML4Q8N228 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCML4Q8N228 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.7■□□□□ 0.74
SCML4Q8N228 MIR3180-5-201ENST00000583743 153 ntBASIC19.7■□□□□ 0.74
SCML4Q8N228 HEIH-201ENST00000623091 1652 ntBASIC19.7■□□□□ 0.74
SCML4Q8N228 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.7■□□□□ 0.74
SCML4Q8N228 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCML4Q8N228 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SCML4Q8N228 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
SCML4Q8N228 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SCML4Q8N228 AL049812.1-201ENST00000432563 2267 ntBASIC19.69■□□□□ 0.74
SCML4Q8N228 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCML4Q8N228 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SCML4Q8N228 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.69■□□□□ 0.74
SCML4Q8N228 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 NEK4P2-201ENST00000580004 1012 ntBASIC19.69■□□□□ 0.74
SCML4Q8N228 AC141257.4-201ENST00000634557 245 ntBASIC19.69■□□□□ 0.74
SCML4Q8N228 AC136944.6-201ENST00000634818 245 ntBASIC19.69■□□□□ 0.74
SCML4Q8N228 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SCML4Q8N228 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SCML4Q8N228 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.69■□□□□ 0.74
SCML4Q8N228 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCML4Q8N228 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.69■□□□□ 0.74
SCML4Q8N228 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.68■□□□□ 0.74
SCML4Q8N228 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.68■□□□□ 0.74
SCML4Q8N228 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SCML4Q8N228 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.68■□□□□ 0.74
SCML4Q8N228 LIN28AP1-201ENST00000429574 405 ntBASIC19.68■□□□□ 0.74
SCML4Q8N228 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.68■□□□□ 0.74
SCML4Q8N228 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SCML4Q8N228 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.68■□□□□ 0.74
SCML4Q8N228 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SCML4Q8N228 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.68■□□□□ 0.74
SCML4Q8N228 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.68■□□□□ 0.74
SCML4Q8N228 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCML4Q8N228 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms