Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.83■□□□□ 0.61
TMEFF1Q8IYR6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 UNC93B7-201ENST00000509439 705 ntBASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 AC111152.3-201ENST00000569699 673 ntBASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEFF1Q8IYR6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 AC004870.1-201ENST00000315132 882 ntBASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 AP002383.4-201ENST00000442518 975 ntBASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 ZNF815P-204ENST00000434898 1737 ntBASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEFF1Q8IYR6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 FDX1P1-201ENST00000449115 551 ntBASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 AP002414.4-201ENST00000589764 1148 ntBASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms