Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 AC105265.2-201ENST00000467189 838 ntBASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 AC012414.1-201ENST00000556676 535 ntBASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 NKILA-202ENST00000614771 2598 ntBASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 CICP6-201ENST00000457191 2729 ntBASIC17.19■□□□□ 0.34
CROCCP3Q8IVE0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 TPRG1LP1-201ENST00000598702 760 ntBASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 KRT8P17-201ENST00000453110 1448 ntBASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 AC135776.1-201ENST00000319817 2481 ntBASIC17.18■□□□□ 0.34
CROCCP3Q8IVE0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 AL596257.1-201ENST00000641463 2694 ntBASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 AC027682.1-201ENST00000562846 899 ntBASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 AC008764.7-201ENST00000593779 1081 ntBASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 AL356652.1-201ENST00000615962 565 ntBASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms