Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 AC091076.1-201ENST00000610741 619 ntBASIC21.16■□□□□ 0.98
TRIM50Q86XT4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 AFG3L1P-217ENST00000557444 2447 ntBASIC21.16■□□□□ 0.98
TRIM50Q86XT4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM50Q86XT4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 AC036111.1-201ENST00000533973 1582 ntBASIC21.15■□□□□ 0.98
TRIM50Q86XT4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 FAM86EP-206ENST00000510506 987 ntBASIC21.15■□□□□ 0.98
TRIM50Q86XT4 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM50Q86XT4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM50Q86XT4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM50Q86XT4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 SPDYE15P-201ENST00000424157 909 ntBASIC21.14■□□□□ 0.97
TRIM50Q86XT4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.14■□□□□ 0.97
TRIM50Q86XT4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 NEK4P2-201ENST00000580004 1012 ntBASIC21.14■□□□□ 0.97
TRIM50Q86XT4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 TEX21P-204ENST00000641479 1693 ntBASIC21.14■□□□□ 0.97
TRIM50Q86XT4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM50Q86XT4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 AL023284.2-201ENST00000405850 579 ntBASIC21.13■□□□□ 0.97
TRIM50Q86XT4 PCED1CP-201ENST00000419887 785 ntBASIC21.13■□□□□ 0.97
TRIM50Q86XT4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 AL121956.5-201ENST00000625261 221 ntBASIC21.13■□□□□ 0.97
TRIM50Q86XT4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM50Q86XT4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 AP000523.1-201ENST00000398242 1049 ntBASIC21.12■□□□□ 0.97
TRIM50Q86XT4 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM50Q86XT4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms