Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LDB1Q86U70 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LDB1Q86U70 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 AC004951.3-201ENST00000418645 1148 ntBASIC18.92■□□□□ 0.62
LDB1Q86U70 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.92■□□□□ 0.62
LDB1Q86U70 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 CD177P1-201ENST00000606252 935 ntBASIC18.92■□□□□ 0.62
LDB1Q86U70 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 TMEM191A-211ENST00000637163 1067 ntBASIC18.92■□□□□ 0.62
LDB1Q86U70 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.92■□□□□ 0.62
LDB1Q86U70 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB1Q86U70 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LDB1Q86U70 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB1Q86U70 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.92■□□□□ 0.62
LDB1Q86U70 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LDB1Q86U70 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LDB1Q86U70 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 RPS2P55-201ENST00000397318 883 ntBASIC18.91■□□□□ 0.62
LDB1Q86U70 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 AC107956.1-201ENST00000494359 873 ntBASIC18.91■□□□□ 0.62
LDB1Q86U70 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.91■□□□□ 0.62
LDB1Q86U70 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LDB1Q86U70 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.91■□□□□ 0.62
LDB1Q86U70 Z99916.2-201ENST00000604037 246 ntBASIC18.91■□□□□ 0.62
LDB1Q86U70 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.91■□□□□ 0.62
LDB1Q86U70 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB1Q86U70 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.91■□□□□ 0.62
LDB1Q86U70 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB1Q86U70 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.91■□□□□ 0.62
LDB1Q86U70 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 MESTP1-201ENST00000404287 994 ntBASIC18.9■□□□□ 0.62
LDB1Q86U70 B3GAT3P1-201ENST00000471720 806 ntBASIC18.9■□□□□ 0.62
LDB1Q86U70 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LDB1Q86U70 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.9■□□□□ 0.62
LDB1Q86U70 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 AC113410.3-201ENST00000623366 203 ntBASIC18.9■□□□□ 0.62
LDB1Q86U70 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB1Q86U70 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.9■□□□□ 0.62
LDB1Q86U70 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB1Q86U70 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LDB1Q86U70 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
LDB1Q86U70 AC104581.1-202ENST00000635932 2618 ntBASIC18.89■□□□□ 0.62
LDB1Q86U70 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms