Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 AP003071.4-201ENST00000562276 1284 ntBASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 AC068587.9-201ENST00000641814 219 ntBASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 AIRN-201ENST00000601203 4374 ntBASIC16.33■□□□□ 0.21
COLCA1Q6ZS62 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COLCA1Q6ZS62 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COLCA1Q6ZS62 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
COLCA1Q6ZS62 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 AP005242.2-201ENST00000580065 1175 ntBASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 HEIH-201ENST00000623091 1652 ntBASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COLCA1Q6ZS62 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 MFAP1P1-201ENST00000442257 1255 ntBASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 CA15P1-201ENST00000481698 905 ntBASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 AC097488.1-201ENST00000507834 756 ntBASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 AL020996.1-203ENST00000536896 2307 ntBASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 MIR4785-201ENST00000585005 73 ntBASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COLCA1Q6ZS62 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 SLC25A1P4-201ENST00000567977 778 ntBASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.31■□□□□ 0.2
COLCA1Q6ZS62 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 TSPY7P-201ENST00000431358 1114 ntBASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 RBM17P1-201ENST00000453646 1190 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms