Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TSPY21P-201ENST00000433481 731 ntBASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 AC130371.2-201ENST00000619443 611 ntBASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 FAM197Y4-202ENST00000622692 608 ntBASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 TMEM191A-211ENST00000637163 1067 ntBASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 MESTP1-201ENST00000404287 994 ntBASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 AL158047.1-201ENST00000445918 881 ntBASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 AC120498.9-201ENST00000339021 3867 ntBASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.04■□□□□ 0.32
NHLRC1Q6VVB1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 RPS2P55-201ENST00000397318 883 ntBASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 AC011506.1-201ENST00000474329 610 ntBASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 AC091390.4-202ENST00000476426 537 ntBASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 AC107956.1-201ENST00000494359 873 ntBASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 KRT16P1-201ENST00000399124 1418 ntBASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NHLRC1Q6VVB1 RCC2P6-201ENST00000526625 1557 ntBASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 AC026271.3-201ENST00000571884 352 ntBASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 Z99916.2-201ENST00000604037 246 ntBASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 CR392000.1-201ENST00000624770 1228 ntBASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NHLRC1Q6VVB1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NHLRC1Q6VVB1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NHLRC1Q6VVB1 KRT8P11-201ENST00000409686 1436 ntBASIC17.02■□□□□ 0.31
NHLRC1Q6VVB1 AL135905.2-201ENST00000584934 1404 ntBASIC17.02■□□□□ 0.31
NHLRC1Q6VVB1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms