Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 AKR1B10P2-201ENST00000577332 927 ntBASIC15.52■□□□□ 0.08
TREML4Q6UXN2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TREML4Q6UXN2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 CROCCP3-202ENST00000420820 1947 ntBASIC15.52■□□□□ 0.07
TREML4Q6UXN2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
TREML4Q6UXN2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 LIN28AP1-201ENST00000429574 405 ntBASIC15.51■□□□□ 0.07
TREML4Q6UXN2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 WWOX-216ENST00000569818 525 ntBASIC15.51■□□□□ 0.07
TREML4Q6UXN2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 AC012183.1-201ENST00000625197 499 ntBASIC15.51■□□□□ 0.07
TREML4Q6UXN2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
TREML4Q6UXN2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 PHGDH-210ENST00000641115 1638 ntBASIC15.5■□□□□ 0.07
TREML4Q6UXN2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 AC098799.1-201ENST00000504752 800 ntBASIC15.5■□□□□ 0.07
TREML4Q6UXN2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 AC091076.1-201ENST00000610741 619 ntBASIC15.5■□□□□ 0.07
TREML4Q6UXN2 AL121829.2-201ENST00000620908 328 ntBASIC15.5■□□□□ 0.07
TREML4Q6UXN2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 NBPF21P-201ENST00000425093 1451 ntBASIC15.5■□□□□ 0.07
TREML4Q6UXN2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.5■□□□□ 0.07
TREML4Q6UXN2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TREML4Q6UXN2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms