Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 AL031598.1-201ENST00000561511 1773 ntBASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 SNORA78-201ENST00000459373 127 ntBASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 AC084018.2-201ENST00000613093 2607 ntBASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXR1Q6PIV2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 ECEL1P3-201ENST00000427961 737 ntBASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 RN7SL471P-201ENST00000580476 299 ntBASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 MIR4497-201ENST00000583208 89 ntBASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXR1Q6PIV2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 Z99916.2-201ENST00000604037 246 ntBASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms