Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 AC005332.7-201ENST00000614046 2005 ntBASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 CKBP1-201ENST00000565489 1086 ntBASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD3Q6PCD5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 ECEL1P2-202ENST00000465689 757 ntBASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 KRT18P22-201ENST00000402024 1347 ntBASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD3Q6PCD5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 TSPY14P-201ENST00000303979 915 ntBASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 TSPY23P-201ENST00000440136 739 ntBASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 EGLN1P1-201ENST00000531623 762 ntBASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD3Q6PCD5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 AC093503.3-201ENST00000624917 2352 ntBASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 RCN1P1-201ENST00000400413 996 ntBASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD3Q6PCD5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms