Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MRPL54Q6P161 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
MRPL54Q6P161 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MRPL54Q6P161 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.33□□□□□ -0.12
MRPL54Q6P161 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.33□□□□□ -0.12
MRPL54Q6P161 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.33□□□□□ -0.12
MRPL54Q6P161 MIR4466-201ENST00000606121 54 ntBASIC14.33□□□□□ -0.12
MRPL54Q6P161 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL54Q6P161 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL54Q6P161 PKD1P5-201ENST00000532415 10291 ntBASIC14.33□□□□□ -0.12
MRPL54Q6P161 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 AC124067.4-201ENST00000519691 2379 ntBASIC14.32□□□□□ -0.12
MRPL54Q6P161 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 AC073592.3-201ENST00000625118 1834 ntBASIC14.32□□□□□ -0.12
MRPL54Q6P161 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.32□□□□□ -0.12
MRPL54Q6P161 AC097381.1-201ENST00000429019 1296 ntBASIC14.32□□□□□ -0.12
MRPL54Q6P161 CDV3P1-201ENST00000471403 739 ntBASIC14.32□□□□□ -0.12
MRPL54Q6P161 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MRPL54Q6P161 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL54Q6P161 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL54Q6P161 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.31□□□□□ -0.12
MRPL54Q6P161 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms