Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 AL138781.2-201ENST00000617896 1843 ntBASIC19.88■□□□□ 0.77
RNF43Q68DV7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 AC096733.2-201ENST00000609937 1394 ntBASIC19.88■□□□□ 0.77
RNF43Q68DV7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RNF43Q68DV7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF43Q68DV7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 AC004951.3-201ENST00000418645 1148 ntBASIC19.87■□□□□ 0.77
RNF43Q68DV7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 DUX4L26-201ENST00000489078 1255 ntBASIC19.87■□□□□ 0.77
RNF43Q68DV7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 AL160286.2-201ENST00000567150 934 ntBASIC19.87■□□□□ 0.77
RNF43Q68DV7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF43Q68DV7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF43Q68DV7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 AL390955.1-201ENST00000428694 934 ntBASIC19.86■□□□□ 0.77
RNF43Q68DV7 AC091390.4-202ENST00000476426 537 ntBASIC19.86■□□□□ 0.77
RNF43Q68DV7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 AC010947.1-201ENST00000623454 693 ntBASIC19.86■□□□□ 0.77
RNF43Q68DV7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF43Q68DV7 KRT8P41-201ENST00000533985 1514 ntBASIC19.86■□□□□ 0.77
RNF43Q68DV7 CYP2D8P-201ENST00000433633 1490 ntBASIC19.86■□□□□ 0.77
RNF43Q68DV7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF43Q68DV7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 AC011298.2-201ENST00000617989 482 ntBASIC19.85■□□□□ 0.77
RNF43Q68DV7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms