Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHIC1Q5VXU3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC32.65■■■□□ 2.82
CHIC1Q5VXU3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC32.65■■■□□ 2.82
CHIC1Q5VXU3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 AP002982.1-201ENST00000492365 877 ntBASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 TRIM36-IT1-201ENST00000503723 881 ntBASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 AC073195.1-201ENST00000607241 877 ntBASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC32.64■■■□□ 2.82
CHIC1Q5VXU3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC32.64■■■□□ 2.81
CHIC1Q5VXU3 AL049812.1-201ENST00000432563 2267 ntBASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 IL12A-205ENST00000480787 863 ntTSL 3 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CHIC1Q5VXU3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 AL353807.1-201ENST00000427475 662 ntBASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 AC012618.2-201ENST00000428058 849 ntBASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 AC004918.3-201ENST00000602609 925 ntBASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHIC1Q5VXU3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 FAM197Y1-201ENST00000421178 764 ntBASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 AC011506.1-201ENST00000474329 610 ntBASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 AC008550.1-201ENST00000511500 884 ntBASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 CR392000.1-201ENST00000624770 1228 ntBASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC32.61■■■□□ 2.81
CHIC1Q5VXU3 AL161938.1-201ENST00000569833 2180 ntBASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 AL049637.2-201ENST00000641778 930 ntBASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHIC1Q5VXU3 FP475955.4-201ENST00000623131 1990 ntBASIC32.59■■■□□ 2.81
CHIC1Q5VXU3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHIC1Q5VXU3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC32.59■■■□□ 2.81
CHIC1Q5VXU3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHIC1Q5VXU3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHIC1Q5VXU3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms