Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 AC133041.1-202ENST00000642053 222 ntBASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIF1Q5T3J3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRIF1Q5T3J3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.89■□□□□ 0.46
LRIF1Q5T3J3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 KRT8P41-201ENST00000533985 1514 ntBASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 AC069152.1-201ENST00000438030 544 ntBASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 PRKY-204ENST00000533551 1019 ntBASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.89■□□□□ 0.45
LRIF1Q5T3J3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 NBPF21P-201ENST00000425093 1451 ntBASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 HEIH-201ENST00000623091 1652 ntBASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 AC138932.1-201ENST00000534164 6830 ntBASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.88■□□□□ 0.45
LRIF1Q5T3J3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 ABALON-201ENST00000629058 1903 ntBASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms