Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 AC096733.2-201ENST00000609937 1394 ntBASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 KRT8P3-201ENST00000519669 1449 ntBASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 AL355355.2-201ENST00000442321 338 ntBASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 DGCR10-201ENST00000609839 495 ntBASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
CTSL3PQ5NE16 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 AC120498.9-201ENST00000339021 3867 ntBASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 MIR718-201ENST00000390190 70 ntBASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 Z98044.1-201ENST00000632503 1764 ntBASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSL3PQ5NE16 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSL3PQ5NE16 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSL3PQ5NE16 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms