Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 FEM1AP3-201ENST00000403722 1741 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 TSPY23P-201ENST00000440136 739 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 KRT18P57-201ENST00000443599 1254 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 NTF6B-201ENST00000591913 560 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 RCC2P6-201ENST00000526625 1557 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 AC026271.3-201ENST00000571884 352 ntBASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC4Q5GLZ8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 AC004951.3-201ENST00000418645 1148 ntBASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 AC091390.4-202ENST00000476426 537 ntBASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC4Q5GLZ8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 TERF1P1-201ENST00000311003 1181 ntBASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 AC011506.1-201ENST00000474329 610 ntBASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HERC4Q5GLZ8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HERC4Q5GLZ8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HERC4Q5GLZ8 KRT8P9-201ENST00000558927 1449 ntBASIC21.14■□□□□ 0.98
HERC4Q5GLZ8 AC073508.3-201ENST00000619697 1419 ntBASIC21.14■□□□□ 0.98
HERC4Q5GLZ8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms