Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 AC116351.2-201ENST00000606540 1585 ntBASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 KRT16P5-201ENST00000455284 522 ntBASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 RPS2P4-201ENST00000476944 856 ntBASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 AC079598.2-202ENST00000546624 1451 ntBASIC16.8■□□□□ 0.28
PCGF3Q3KNV8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 PHGDH-210ENST00000641115 1638 ntBASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 AC018470.1-201ENST00000624790 3129 ntBASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCGF3Q3KNV8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 AC009113.1-201ENST00000570267 2443 ntBASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 RARRES2P10-201ENST00000564312 460 ntBASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms