Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2BQ00403 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
GTF2BQ00403 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GTF2BQ00403 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2BQ00403 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 LINC01568-207ENST00000641790 1380 ntBASIC20.72■□□□□ 0.91
GTF2BQ00403 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF2BQ00403 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF2BQ00403 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF2BQ00403 AC128688.1-201ENST00000487626 519 ntBASIC20.72■□□□□ 0.91
GTF2BQ00403 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF2BQ00403 AC083906.6-201ENST00000641366 219 ntBASIC20.72■□□□□ 0.91
GTF2BQ00403 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.72■□□□□ 0.91
GTF2BQ00403 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
GTF2BQ00403 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2BQ00403 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
GTF2BQ00403 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
GTF2BQ00403 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
GTF2BQ00403 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GTF2BQ00403 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF2BQ00403 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.71■□□□□ 0.91
GTF2BQ00403 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.71■□□□□ 0.91
GTF2BQ00403 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF2BQ00403 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF2BQ00403 MIR4674-201ENST00000582457 87 ntBASIC20.71■□□□□ 0.91
GTF2BQ00403 AC133561.5-201ENST00000635547 218 ntBASIC20.71■□□□□ 0.91
GTF2BQ00403 AC068587.9-201ENST00000641814 219 ntBASIC20.71■□□□□ 0.91
GTF2BQ00403 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 AC098818.2-201ENST00000564925 2320 ntBASIC20.71■□□□□ 0.91
GTF2BQ00403 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2BQ00403 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GTF2BQ00403 GPAT2P1-201ENST00000444924 1672 ntBASIC20.7■□□□□ 0.91
GTF2BQ00403 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2BQ00403 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2BQ00403 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2BQ00403 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.7■□□□□ 0.9
GTF2BQ00403 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
GTF2BQ00403 AL023284.2-201ENST00000405850 579 ntBASIC20.7■□□□□ 0.9
GTF2BQ00403 AC211429.1-201ENST00000415277 523 ntBASIC20.7■□□□□ 0.9
GTF2BQ00403 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.7■□□□□ 0.9
GTF2BQ00403 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2BQ00403 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.7■□□□□ 0.9
GTF2BQ00403 FAM87A-204ENST00000613235 858 ntBASIC20.7■□□□□ 0.9
GTF2BQ00403 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.7■□□□□ 0.9
GTF2BQ00403 KRT18P22-201ENST00000402024 1347 ntBASIC20.7■□□□□ 0.9
GTF2BQ00403 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.7■□□□□ 0.9
GTF2BQ00403 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2BQ00403 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
GTF2BQ00403 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GTF2BQ00403 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2BQ00403 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GTF2BQ00403 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 ECEL1P2-202ENST00000465689 757 ntBASIC20.69■□□□□ 0.9
GTF2BQ00403 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
GTF2BQ00403 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 HEIH-201ENST00000623091 1652 ntBASIC20.69■□□□□ 0.9
GTF2BQ00403 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
GTF2BQ00403 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.69■□□□□ 0.9
GTF2BQ00403 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2BQ00403 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2BQ00403 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.68■□□□□ 0.9
GTF2BQ00403 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2BQ00403 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms