Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.01■□□□□ 0.47
RAE1P78406 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.01■□□□□ 0.47
RAE1P78406 AC011298.2-201ENST00000617989 482 ntBASIC18.01■□□□□ 0.47
RAE1P78406 AC130371.2-201ENST00000619443 611 ntBASIC18.01■□□□□ 0.47
RAE1P78406 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.01■□□□□ 0.47
RAE1P78406 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.01■□□□□ 0.47
RAE1P78406 AC005082.1-201ENST00000413042 2259 ntBASIC18.01■□□□□ 0.47
RAE1P78406 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.01■□□□□ 0.47
RAE1P78406 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.01■□□□□ 0.47
RAE1P78406 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18■□□□□ 0.47
RAE1P78406 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAE1P78406 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 HEIH-201ENST00000623091 1652 ntBASIC18■□□□□ 0.47
RAE1P78406 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18■□□□□ 0.47
RAE1P78406 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18■□□□□ 0.47
RAE1P78406 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18■□□□□ 0.47
RAE1P78406 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RAE1P78406 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18■□□□□ 0.47
RAE1P78406 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAE1P78406 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
RAE1P78406 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18■□□□□ 0.47
RAE1P78406 SAPCD2P4-201ENST00000424595 1171 ntBASIC18■□□□□ 0.47
RAE1P78406 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18■□□□□ 0.47
RAE1P78406 AC142381.4-202ENST00000563973 229 ntBASIC18■□□□□ 0.47
RAE1P78406 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18■□□□□ 0.47
RAE1P78406 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18■□□□□ 0.47
RAE1P78406 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18■□□□□ 0.47
RAE1P78406 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RAE1P78406 KATNBL1P6-202ENST00000562413 1466 ntBASIC18■□□□□ 0.47
RAE1P78406 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18■□□□□ 0.47
RAE1P78406 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAE1P78406 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RAE1P78406 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 FAM197Y1-201ENST00000421178 764 ntBASIC17.99■□□□□ 0.47
RAE1P78406 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 B3GAT3P1-201ENST00000471720 806 ntBASIC17.99■□□□□ 0.47
RAE1P78406 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.99■□□□□ 0.47
RAE1P78406 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAE1P78406 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.99■□□□□ 0.47
RAE1P78406 MIR6786-201ENST00000616843 113 ntBASIC17.99■□□□□ 0.47
RAE1P78406 AC068587.9-201ENST00000641814 219 ntBASIC17.99■□□□□ 0.47
RAE1P78406 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.99■□□□□ 0.47
RAE1P78406 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.99■□□□□ 0.47
RAE1P78406 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAE1P78406 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 MTMR9LP-203ENST00000426597 1545 ntBASIC17.98■□□□□ 0.47
RAE1P78406 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.98■□□□□ 0.47
RAE1P78406 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RAE1P78406 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.98■□□□□ 0.47
RAE1P78406 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.98■□□□□ 0.47
RAE1P78406 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RAE1P78406 GCSHP5-201ENST00000443090 522 ntBASIC17.98■□□□□ 0.47
RAE1P78406 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RAE1P78406 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.98■□□□□ 0.47
RAE1P78406 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAE1P78406 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.98■□□□□ 0.47
RAE1P78406 CKBP1-201ENST00000565489 1086 ntBASIC17.98■□□□□ 0.47
RAE1P78406 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.98■□□□□ 0.47
RAE1P78406 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAE1P78406 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms