Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H3AP68431 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H3AP68431 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H3AP68431 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H3AP68431 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H3AP68431 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 ABHD17AP1-201ENST00000358206 933 ntBASIC16.58■□□□□ 0.24
HIST1H3AP68431 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 B3GAT3P1-201ENST00000471720 806 ntBASIC16.58■□□□□ 0.24
HIST1H3AP68431 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H3AP68431 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H3AP68431 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 KRT8P3-201ENST00000519669 1449 ntBASIC16.57■□□□□ 0.24
HIST1H3AP68431 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 RPS2P55-201ENST00000397318 883 ntBASIC16.57■□□□□ 0.24
HIST1H3AP68431 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 AC107956.1-201ENST00000494359 873 ntBASIC16.57■□□□□ 0.24
HIST1H3AP68431 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 CKBP1-201ENST00000565489 1086 ntBASIC16.57■□□□□ 0.24
HIST1H3AP68431 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H3AP68431 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H3AP68431 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 FSCN1P1-201ENST00000568912 1481 ntBASIC16.56■□□□□ 0.24
HIST1H3AP68431 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 FAM197Y1-201ENST00000421178 764 ntBASIC16.56■□□□□ 0.24
HIST1H3AP68431 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 AC012618.2-201ENST00000428058 849 ntBASIC16.56■□□□□ 0.24
HIST1H3AP68431 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 CD177P1-201ENST00000606252 935 ntBASIC16.56■□□□□ 0.24
HIST1H3AP68431 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST1H3AP68431 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H3AP68431 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H3AP68431 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H3AP68431 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms