Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB1AP62820 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
RAB1AP62820 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB1AP62820 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB1AP62820 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB1AP62820 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB1AP62820 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB1AP62820 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB1AP62820 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB1AP62820 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB1AP62820 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB1AP62820 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB1AP62820 TSPY23P-201ENST00000440136 739 ntBASIC16.67■□□□□ 0.26
RAB1AP62820 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB1AP62820 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB1AP62820 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RAB1AP62820 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB1AP62820 AL355075.4-201ENST00000554988 638 ntBASIC16.67■□□□□ 0.26
RAB1AP62820 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 SLC25A1P4-201ENST00000567977 778 ntBASIC16.67■□□□□ 0.26
RAB1AP62820 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RAB1AP62820 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB1AP62820 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 KRT8P11-201ENST00000409686 1436 ntBASIC16.67■□□□□ 0.26
RAB1AP62820 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB1AP62820 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 AC098818.2-201ENST00000564925 2320 ntBASIC16.67■□□□□ 0.26
RAB1AP62820 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1AP62820 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB1AP62820 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1AP62820 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.66■□□□□ 0.26
RAB1AP62820 RBM17P1-201ENST00000453646 1190 ntBASIC16.66■□□□□ 0.26
RAB1AP62820 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 AC097488.1-201ENST00000507834 756 ntBASIC16.66■□□□□ 0.26
RAB1AP62820 PRSS44-201ENST00000515154 1146 ntBASIC16.66■□□□□ 0.26
RAB1AP62820 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1AP62820 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB1AP62820 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.66■□□□□ 0.26
RAB1AP62820 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1AP62820 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB1AP62820 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1AP62820 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB1AP62820 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1AP62820 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1AP62820 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB1AP62820 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.66■□□□□ 0.26
RAB1AP62820 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RAB1AP62820 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RAB1AP62820 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RAB1AP62820 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB1AP62820 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RAB1AP62820 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB1AP62820 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.65■□□□□ 0.26
RAB1AP62820 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB1AP62820 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB1AP62820 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms