Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 PCED1CP-201ENST00000419887 785 ntBASIC24.27■■□□□ 1.48
EIF4A1P60842 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.27■■□□□ 1.48
EIF4A1P60842 AC024243.1-201ENST00000609234 778 ntBASIC24.27■■□□□ 1.48
EIF4A1P60842 AP000550.4-202ENST00000639755 178 ntBASIC24.27■■□□□ 1.48
EIF4A1P60842 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
EIF4A1P60842 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
EIF4A1P60842 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EIF4A1P60842 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
EIF4A1P60842 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
EIF4A1P60842 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
EIF4A1P60842 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
EIF4A1P60842 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EIF4A1P60842 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EIF4A1P60842 AC007952.6-201ENST00000573168 2673 ntBASIC24.27■■□□□ 1.48
EIF4A1P60842 AC003957.1-201ENST00000625108 2673 ntBASIC24.27■■□□□ 1.48
EIF4A1P60842 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
EIF4A1P60842 KRT8P32-201ENST00000512863 1461 ntBASIC24.26■■□□□ 1.47
EIF4A1P60842 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.26■■□□□ 1.47
EIF4A1P60842 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
EIF4A1P60842 SPDYE13P-201ENST00000445314 798 ntBASIC24.26■■□□□ 1.47
EIF4A1P60842 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.26■■□□□ 1.47
EIF4A1P60842 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
EIF4A1P60842 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.26■■□□□ 1.47
EIF4A1P60842 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
EIF4A1P60842 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
EIF4A1P60842 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
EIF4A1P60842 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
EIF4A1P60842 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
EIF4A1P60842 AC008556.1-201ENST00000610908 2040 ntBASIC24.26■■□□□ 1.47
EIF4A1P60842 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
EIF4A1P60842 AC005332.1-201ENST00000577698 1310 ntBASIC24.26■■□□□ 1.47
EIF4A1P60842 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EIF4A1P60842 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
EIF4A1P60842 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.26■■□□□ 1.47
EIF4A1P60842 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
EIF4A1P60842 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.25■■□□□ 1.47
EIF4A1P60842 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.25■■□□□ 1.47
EIF4A1P60842 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.25■■□□□ 1.47
EIF4A1P60842 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.25■■□□□ 1.47
EIF4A1P60842 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.25■■□□□ 1.47
EIF4A1P60842 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.25■■□□□ 1.47
EIF4A1P60842 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.25■■□□□ 1.47
EIF4A1P60842 SEC1P-202ENST00000473944 940 ntBASIC24.25■■□□□ 1.47
EIF4A1P60842 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.25■■□□□ 1.47
EIF4A1P60842 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.25■■□□□ 1.47
EIF4A1P60842 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.25■■□□□ 1.47
EIF4A1P60842 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.25■■□□□ 1.47
EIF4A1P60842 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
EIF4A1P60842 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EIF4A1P60842 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
EIF4A1P60842 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
EIF4A1P60842 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.24■■□□□ 1.47
EIF4A1P60842 UPK3BP1-201ENST00000428678 509 ntBASIC24.24■■□□□ 1.47
EIF4A1P60842 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 RASA4DP-201ENST00000460726 1199 ntBASIC24.24■■□□□ 1.47
EIF4A1P60842 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.24■■□□□ 1.47
EIF4A1P60842 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 AL136038.3-201ENST00000561909 1096 ntBASIC24.24■■□□□ 1.47
EIF4A1P60842 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.24■■□□□ 1.47
EIF4A1P60842 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 AC116407.4-201ENST00000623319 1061 ntBASIC24.24■■□□□ 1.47
EIF4A1P60842 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.24■■□□□ 1.47
EIF4A1P60842 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
EIF4A1P60842 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
EIF4A1P60842 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.23■■□□□ 1.47
EIF4A1P60842 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
EIF4A1P60842 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
EIF4A1P60842 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.23■■□□□ 1.47
EIF4A1P60842 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
EIF4A1P60842 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.23■■□□□ 1.47
EIF4A1P60842 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.23■■□□□ 1.47
EIF4A1P60842 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.23■■□□□ 1.47
EIF4A1P60842 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.23■■□□□ 1.47
EIF4A1P60842 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.23■■□□□ 1.47
EIF4A1P60842 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
EIF4A1P60842 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms