Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLDN6P56747 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN6P56747 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CLDN6P56747 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLDN6P56747 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN6P56747 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN6P56747 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN6P56747 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN6P56747 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN6P56747 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN6P56747 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN6P56747 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 AL031008.1-201ENST00000619963 541 ntBASIC18.2■□□□□ 0.5
CLDN6P56747 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
CLDN6P56747 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CLDN6P56747 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN6P56747 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN6P56747 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN6P56747 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN6P56747 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN6P56747 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN6P56747 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN6P56747 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN6P56747 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN6P56747 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN6P56747 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN6P56747 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN6P56747 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.19■□□□□ 0.5
CLDN6P56747 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
CLDN6P56747 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN6P56747 KRT17P6-201ENST00000453795 1220 ntBASIC18.19■□□□□ 0.5
CLDN6P56747 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN6P56747 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN6P56747 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN6P56747 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CLDN6P56747 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN6P56747 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN6P56747 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN6P56747 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN6P56747 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN6P56747 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN6P56747 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CLDN6P56747 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN6P56747 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 AC079781.3-201ENST00000449110 356 ntBASIC18.18■□□□□ 0.5
CLDN6P56747 AC034232.1-201ENST00000506026 1064 ntBASIC18.18■□□□□ 0.5
CLDN6P56747 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN6P56747 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN6P56747 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN6P56747 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.18■□□□□ 0.5
CLDN6P56747 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN6P56747 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN6P56747 LINC01006-201ENST00000333319 2292 ntBASIC18.18■□□□□ 0.5
CLDN6P56747 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 AL162741.1-201ENST00000565563 1558 ntBASIC18.17■□□□□ 0.5
CLDN6P56747 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
CLDN6P56747 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN6P56747 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms