Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.63■□□□□ 0.25
FOXG1P55316 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
FOXG1P55316 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
FOXG1P55316 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXG1P55316 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXG1P55316 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
FOXG1P55316 AC113347.1-201ENST00000413321 391 ntBASIC16.62■□□□□ 0.25
FOXG1P55316 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 RN7SL850P-201ENST00000579959 291 ntBASIC16.62■□□□□ 0.25
FOXG1P55316 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
FOXG1P55316 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 GPAT2P1-201ENST00000444924 1672 ntBASIC16.62■□□□□ 0.25
FOXG1P55316 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXG1P55316 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXG1P55316 AC073508.3-201ENST00000619697 1419 ntBASIC16.62■□□□□ 0.25
FOXG1P55316 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXG1P55316 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXG1P55316 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXG1P55316 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXG1P55316 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXG1P55316 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXG1P55316 AC010653.2-201ENST00000623505 997 ntBASIC16.61■□□□□ 0.25
FOXG1P55316 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXG1P55316 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXG1P55316 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 KRT8P45-201ENST00000414328 1447 ntBASIC16.61■□□□□ 0.25
FOXG1P55316 KRT8P3-201ENST00000519669 1449 ntBASIC16.61■□□□□ 0.25
FOXG1P55316 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXG1P55316 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXG1P55316 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
FOXG1P55316 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXG1P55316 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FOXG1P55316 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
FOXG1P55316 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FOXG1P55316 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FOXG1P55316 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 HMGA1P5-201ENST00000412453 271 ntBASIC16.6■□□□□ 0.25
FOXG1P55316 AL137013.1-201ENST00000432946 1228 ntBASIC16.6■□□□□ 0.25
FOXG1P55316 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXG1P55316 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXG1P55316 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FOXG1P55316 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXG1P55316 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXG1P55316 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
FOXG1P55316 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FOXG1P55316 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXG1P55316 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXG1P55316 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms