Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
HMGCS2P54868 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.89■■□□□ 1.1
HMGCS2P54868 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
HMGCS2P54868 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGCS2P54868 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HMGCS2P54868 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HMGCS2P54868 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.89■■□□□ 1.09
HMGCS2P54868 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.89■■□□□ 1.09
HMGCS2P54868 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.89■■□□□ 1.09
HMGCS2P54868 AC246785.2-201ENST00000432512 513 ntBASIC21.89■■□□□ 1.09
HMGCS2P54868 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.89■■□□□ 1.09
HMGCS2P54868 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.89■■□□□ 1.09
HMGCS2P54868 AP002414.4-201ENST00000589764 1148 ntBASIC21.89■■□□□ 1.09
HMGCS2P54868 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.89■■□□□ 1.09
HMGCS2P54868 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.89■■□□□ 1.09
HMGCS2P54868 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCS2P54868 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.89■■□□□ 1.09
HMGCS2P54868 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 MIR3917-201ENST00000580971 93 ntBASIC21.88■■□□□ 1.09
HMGCS2P54868 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 AL136038.4-201ENST00000603606 1261 ntBASIC21.88■■□□□ 1.09
HMGCS2P54868 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HMGCS2P54868 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCS2P54868 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.88■■□□□ 1.09
HMGCS2P54868 AL391807.1-203ENST00000604392 2365 ntBASIC21.88■■□□□ 1.09
HMGCS2P54868 Z82202.1-201ENST00000623446 1880 ntBASIC21.88■■□□□ 1.09
HMGCS2P54868 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.87■■□□□ 1.09
HMGCS2P54868 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.87■■□□□ 1.09
HMGCS2P54868 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.87■■□□□ 1.09
HMGCS2P54868 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.87■■□□□ 1.09
HMGCS2P54868 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.87■■□□□ 1.09
HMGCS2P54868 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.87■■□□□ 1.09
HMGCS2P54868 KRT8P26-201ENST00000534154 1276 ntBASIC21.87■■□□□ 1.09
HMGCS2P54868 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.87■■□□□ 1.09
HMGCS2P54868 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.87■■□□□ 1.09
HMGCS2P54868 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
HMGCS2P54868 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCS2P54868 AC093525.10-201ENST00000625130 1569 ntBASIC21.87■■□□□ 1.09
HMGCS2P54868 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HMGCS2P54868 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.86■■□□□ 1.09
HMGCS2P54868 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.86■■□□□ 1.09
HMGCS2P54868 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
HMGCS2P54868 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
HMGCS2P54868 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HMGCS2P54868 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
HMGCS2P54868 UNC93B7-201ENST00000509439 705 ntBASIC21.86■■□□□ 1.09
HMGCS2P54868 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.86■■□□□ 1.09
HMGCS2P54868 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.86■■□□□ 1.09
HMGCS2P54868 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.86■■□□□ 1.09
HMGCS2P54868 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.86■■□□□ 1.09
HMGCS2P54868 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCS2P54868 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCS2P54868 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCS2P54868 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCS2P54868 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.85■■□□□ 1.09
HMGCS2P54868 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCS2P54868 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCS2P54868 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.85■■□□□ 1.09
HMGCS2P54868 MIR662-201ENST00000384847 95 ntBASIC21.85■■□□□ 1.09
HMGCS2P54868 AL845331.1-201ENST00000424978 1190 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms