Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.95■□□□□ 0.3
LHX2P50458 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LHX2P50458 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LHX2P50458 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LHX2P50458 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.94■□□□□ 0.3
LHX2P50458 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.94■□□□□ 0.3
LHX2P50458 YBX1P2-201ENST00000489612 999 ntBASIC16.94■□□□□ 0.3
LHX2P50458 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.94■□□□□ 0.3
LHX2P50458 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.94■□□□□ 0.3
LHX2P50458 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.94■□□□□ 0.3
LHX2P50458 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
LHX2P50458 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.94■□□□□ 0.3
LHX2P50458 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LHX2P50458 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LHX2P50458 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.93■□□□□ 0.3
LHX2P50458 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LHX2P50458 AC005332.7-201ENST00000614046 2005 ntBASIC16.93■□□□□ 0.3
LHX2P50458 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.93■□□□□ 0.3
LHX2P50458 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.93■□□□□ 0.3
LHX2P50458 AC009947.2-201ENST00000444014 672 ntBASIC16.93■□□□□ 0.3
LHX2P50458 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LHX2P50458 WWOX-216ENST00000569818 525 ntBASIC16.93■□□□□ 0.3
LHX2P50458 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.93■□□□□ 0.3
LHX2P50458 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 AC011558.1-201ENST00000623459 338 ntBASIC16.93■□□□□ 0.3
LHX2P50458 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LHX2P50458 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
LHX2P50458 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LHX2P50458 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.92■□□□□ 0.3
LHX2P50458 AL512353.2-201ENST00000448759 1962 ntBASIC16.92■□□□□ 0.3
LHX2P50458 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.92■□□□□ 0.3
LHX2P50458 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX2P50458 RNF152P1-201ENST00000397754 604 ntBASIC16.92■□□□□ 0.3
LHX2P50458 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.92■□□□□ 0.3
LHX2P50458 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.92■□□□□ 0.3
LHX2P50458 MCCD1P1-208ENST00000445732 328 ntBASIC16.92■□□□□ 0.3
LHX2P50458 AC063952.2-201ENST00000498792 1227 ntBASIC16.92■□□□□ 0.3
LHX2P50458 KRT18P35-201ENST00000510488 1269 ntBASIC16.92■□□□□ 0.3
LHX2P50458 NEK4P2-201ENST00000580004 1012 ntBASIC16.92■□□□□ 0.3
LHX2P50458 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX2P50458 AL445228.2-201ENST00000605589 952 ntBASIC16.92■□□□□ 0.3
LHX2P50458 AL031432.5-201ENST00000641059 760 ntBASIC16.92■□□□□ 0.3
LHX2P50458 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX2P50458 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX2P50458 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX2P50458 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LHX2P50458 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LHX2P50458 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX2P50458 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms