Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SSR1P43307 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SSR1P43307 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SSR1P43307 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR1P43307 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SSR1P43307 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SSR1P43307 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR1P43307 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.15■□□□□ 0.82
SSR1P43307 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SSR1P43307 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.15■□□□□ 0.82
SSR1P43307 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR1P43307 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SSR1P43307 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 AL023875.1-201ENST00000640777 796 ntBASIC20.15■□□□□ 0.82
SSR1P43307 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SSR1P43307 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.15■□□□□ 0.82
SSR1P43307 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR1P43307 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR1P43307 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SSR1P43307 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SSR1P43307 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.14■□□□□ 0.81
SSR1P43307 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 ESRRAP1-201ENST00000400596 1257 ntBASIC20.14■□□□□ 0.81
SSR1P43307 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.14■□□□□ 0.81
SSR1P43307 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR1P43307 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.14■□□□□ 0.81
SSR1P43307 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.14■□□□□ 0.81
SSR1P43307 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.14■□□□□ 0.81
SSR1P43307 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR1P43307 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.14■□□□□ 0.81
SSR1P43307 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.14■□□□□ 0.81
SSR1P43307 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SSR1P43307 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SSR1P43307 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 KRASP1-201ENST00000407852 552 ntBASIC20.13■□□□□ 0.81
SSR1P43307 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR1P43307 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR1P43307 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 MTDHP1-201ENST00000605323 784 ntBASIC20.13■□□□□ 0.81
SSR1P43307 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.13■□□□□ 0.81
SSR1P43307 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR1P43307 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR1P43307 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR1P43307 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SSR1P43307 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.12■□□□□ 0.81
SSR1P43307 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
SSR1P43307 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR1P43307 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.12■□□□□ 0.81
SSR1P43307 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SSR1P43307 AC239809.2-201ENST00000415381 517 ntBASIC20.12■□□□□ 0.81
SSR1P43307 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
SSR1P43307 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
SSR1P43307 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms