Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 AC090164.3-201ENST00000610780 2143 ntBASIC13.09□□□□□ -0.31
RPL13AP40429 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RPL13AP40429 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RPL13AP40429 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RPL13AP40429 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.08□□□□□ -0.32
RPL13AP40429 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.08□□□□□ -0.32
RPL13AP40429 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.08□□□□□ -0.32
RPL13AP40429 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.08□□□□□ -0.32
RPL13AP40429 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.08□□□□□ -0.32
RPL13AP40429 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RPL13AP40429 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RPL13AP40429 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.08□□□□□ -0.32
RPL13AP40429 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
RPL13AP40429 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 AC012313.1-201ENST00000593393 3059 ntBASIC13.08□□□□□ -0.32
RPL13AP40429 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.08□□□□□ -0.32
RPL13AP40429 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL13AP40429 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL13AP40429 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RPL13AP40429 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 AC011270.2-201ENST00000624293 2550 ntBASIC13.07□□□□□ -0.32
RPL13AP40429 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.07□□□□□ -0.32
RPL13AP40429 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RPL13AP40429 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.07□□□□□ -0.32
RPL13AP40429 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.07□□□□□ -0.32
RPL13AP40429 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RPL13AP40429 MIR5787-201ENST00000611784 55 ntBASIC13.07□□□□□ -0.32
RPL13AP40429 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.07□□□□□ -0.32
RPL13AP40429 AL358852.1-201ENST00000623174 1268 ntBASIC13.07□□□□□ -0.32
RPL13AP40429 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.07□□□□□ -0.32
RPL13AP40429 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.07□□□□□ -0.32
RPL13AP40429 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.07□□□□□ -0.32
RPL13AP40429 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.07□□□□□ -0.32
RPL13AP40429 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RPL13AP40429 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RPL13AP40429 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms