Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.04■□□□□ 0.8
CTNNA1P35221 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNNA1P35221 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNNA1P35221 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.03■□□□□ 0.8
CTNNA1P35221 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CTNNA1P35221 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.03■□□□□ 0.8
CTNNA1P35221 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.03■□□□□ 0.8
CTNNA1P35221 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNNA1P35221 AC104771.1-201ENST00000603335 964 ntBASIC20.03■□□□□ 0.8
CTNNA1P35221 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CTNNA1P35221 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CTNNA1P35221 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CTNNA1P35221 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNNA1P35221 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNNA1P35221 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
CTNNA1P35221 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNNA1P35221 POM121L13P-201ENST00000422362 380 ntBASIC20.02■□□□□ 0.8
CTNNA1P35221 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.02■□□□□ 0.8
CTNNA1P35221 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.02■□□□□ 0.8
CTNNA1P35221 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNNA1P35221 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNNA1P35221 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CTNNA1P35221 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTNNA1P35221 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNNA1P35221 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNNA1P35221 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
CTNNA1P35221 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNNA1P35221 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNNA1P35221 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNNA1P35221 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CTNNA1P35221 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.01■□□□□ 0.79
CTNNA1P35221 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.01■□□□□ 0.79
CTNNA1P35221 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CTNNA1P35221 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTNNA1P35221 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNNA1P35221 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNNA1P35221 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNNA1P35221 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNNA1P35221 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CTNNA1P35221 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTNNA1P35221 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20■□□□□ 0.79
CTNNA1P35221 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTNNA1P35221 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20■□□□□ 0.79
CTNNA1P35221 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20■□□□□ 0.79
CTNNA1P35221 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CTNNA1P35221 AC083906.6-201ENST00000641366 219 ntBASIC20■□□□□ 0.79
CTNNA1P35221 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTNNA1P35221 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 AL133373.2-201ENST00000623187 2828 ntBASIC20■□□□□ 0.79
CTNNA1P35221 AC090164.3-201ENST00000610780 2143 ntBASIC20■□□□□ 0.79
CTNNA1P35221 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20■□□□□ 0.79
CTNNA1P35221 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20■□□□□ 0.79
CTNNA1P35221 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNNA1P35221 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNNA1P35221 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CTNNA1P35221 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNNA1P35221 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNNA1P35221 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CTNNA1P35221 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNNA1P35221 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNNA1P35221 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNNA1P35221 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms