Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HOXC8P31273 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 FEM1AP3-201ENST00000403722 1741 ntBASIC20.72■□□□□ 0.91
HOXC8P31273 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HOXC8P31273 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC8P31273 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC8P31273 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC8P31273 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC8P31273 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC8P31273 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.71■□□□□ 0.91
HOXC8P31273 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 BX276092.5-203ENST00000456199 560 ntBASIC20.71■□□□□ 0.91
HOXC8P31273 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 KRT8P26-201ENST00000534154 1276 ntBASIC20.71■□□□□ 0.91
HOXC8P31273 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.71■□□□□ 0.91
HOXC8P31273 AC092329.2-201ENST00000598402 547 ntBASIC20.71■□□□□ 0.91
HOXC8P31273 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC8P31273 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC8P31273 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HOXC8P31273 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC8P31273 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.7■□□□□ 0.91
HOXC8P31273 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
HOXC8P31273 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 MIR564-202ENST00000385049 94 ntBASIC20.7■□□□□ 0.9
HOXC8P31273 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC8P31273 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC8P31273 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
HOXC8P31273 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
HOXC8P31273 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXC8P31273 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXC8P31273 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HOXC8P31273 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HOXC8P31273 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC8P31273 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXC8P31273 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC8P31273 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXC8P31273 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 AC026396.1-201ENST00000419388 421 ntBASIC20.69■□□□□ 0.9
HOXC8P31273 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXC8P31273 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXC8P31273 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXC8P31273 AC010240.3-201ENST00000607688 395 ntBASIC20.69■□□□□ 0.9
HOXC8P31273 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC8P31273 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXC8P31273 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
HOXC8P31273 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC8P31273 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXC8P31273 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 KRT18P23-201ENST00000435622 1283 ntBASIC20.68■□□□□ 0.9
HOXC8P31273 TPM4P1-201ENST00000436100 807 ntBASIC20.68■□□□□ 0.9
HOXC8P31273 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXC8P31273 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC8P31273 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC8P31273 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
HOXC8P31273 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms