Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-FP30511 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.28■□□□□ 0.68
HLA-FP30511 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.68
HLA-FP30511 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-FP30511 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-FP30511 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HLA-FP30511 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
HLA-FP30511 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.27■□□□□ 0.68
HLA-FP30511 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-FP30511 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HLA-FP30511 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-FP30511 KRT18P38-201ENST00000449496 1282 ntBASIC19.27■□□□□ 0.68
HLA-FP30511 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.27■□□□□ 0.68
HLA-FP30511 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-FP30511 GCSHP2-201ENST00000560971 527 ntBASIC19.27■□□□□ 0.68
HLA-FP30511 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.27■□□□□ 0.68
HLA-FP30511 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
HLA-FP30511 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-FP30511 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
HLA-FP30511 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-FP30511 AL032819.2-201ENST00000624543 2162 ntBASIC19.27■□□□□ 0.68
HLA-FP30511 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.27■□□□□ 0.68
HLA-FP30511 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-FP30511 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-FP30511 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.27■□□□□ 0.67
HLA-FP30511 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.27■□□□□ 0.67
HLA-FP30511 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.27■□□□□ 0.67
HLA-FP30511 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-FP30511 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-FP30511 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-FP30511 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.26■□□□□ 0.67
HLA-FP30511 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HLA-FP30511 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
HLA-FP30511 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 MCCD1P1-208ENST00000445732 328 ntBASIC19.26■□□□□ 0.67
HLA-FP30511 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.26■□□□□ 0.67
HLA-FP30511 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.26■□□□□ 0.67
HLA-FP30511 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-FP30511 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HLA-FP30511 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.26■□□□□ 0.67
HLA-FP30511 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-FP30511 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HLA-FP30511 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
HLA-FP30511 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-FP30511 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-FP30511 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-FP30511 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-FP30511 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-FP30511 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-FP30511 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HLA-FP30511 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-FP30511 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-FP30511 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-FP30511 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-FP30511 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.25■□□□□ 0.67
HLA-FP30511 MIR3180-5-201ENST00000583743 153 ntBASIC19.25■□□□□ 0.67
HLA-FP30511 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-FP30511 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-FP30511 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-FP30511 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-FP30511 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-FP30511 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HLA-FP30511 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-FP30511 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-FP30511 AL512353.2-201ENST00000448759 1962 ntBASIC19.24■□□□□ 0.67
HLA-FP30511 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HLA-FP30511 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-FP30511 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-FP30511 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-FP30511 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-FP30511 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-FP30511 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms