Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
PTPN3P26045 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN3P26045 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN3P26045 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.35■□□□□ 0.69
PTPN3P26045 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN3P26045 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN3P26045 Z99916.2-201ENST00000604037 246 ntBASIC19.35■□□□□ 0.69
PTPN3P26045 AC083906.6-201ENST00000641366 219 ntBASIC19.35■□□□□ 0.69
PTPN3P26045 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTPN3P26045 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PTPN3P26045 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN3P26045 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PTPN3P26045 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN3P26045 AL512353.2-201ENST00000448759 1962 ntBASIC19.34■□□□□ 0.69
PTPN3P26045 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PTPN3P26045 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN3P26045 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN3P26045 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN3P26045 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN3P26045 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.34■□□□□ 0.69
PTPN3P26045 AL049637.2-201ENST00000641778 930 ntBASIC19.34■□□□□ 0.69
PTPN3P26045 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PTPN3P26045 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PTPN3P26045 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 FSCN1P1-201ENST00000568912 1481 ntBASIC19.34■□□□□ 0.69
PTPN3P26045 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PTPN3P26045 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PTPN3P26045 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN3P26045 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN3P26045 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.33■□□□□ 0.69
PTPN3P26045 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.33■□□□□ 0.69
PTPN3P26045 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN3P26045 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PTPN3P26045 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPN3P26045 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PTPN3P26045 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 NUDT16P1-203ENST00000513809 620 ntBASIC19.33■□□□□ 0.68
PTPN3P26045 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN3P26045 CKBP1-201ENST00000565489 1086 ntBASIC19.33■□□□□ 0.68
PTPN3P26045 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPN3P26045 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.33■□□□□ 0.68
PTPN3P26045 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN3P26045 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
PTPN3P26045 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPN3P26045 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
PTPN3P26045 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 AC116562.2-201ENST00000507042 360 ntBASIC19.32■□□□□ 0.68
PTPN3P26045 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.32■□□□□ 0.68
PTPN3P26045 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.32■□□□□ 0.68
PTPN3P26045 AP000692.2-201ENST00000608391 879 ntBASIC19.32■□□□□ 0.68
PTPN3P26045 AP001412.1-201ENST00000608405 714 ntBASIC19.32■□□□□ 0.68
PTPN3P26045 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN3P26045 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN3P26045 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN3P26045 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN3P26045 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN3P26045 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTPN3P26045 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPN3P26045 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPN3P26045 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms