Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD2P25440 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD2P25440 AP000974.1-201ENST00000623909 2387 ntBASIC20.35■□□□□ 0.85
BRD2P25440 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
BRD2P25440 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
BRD2P25440 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
BRD2P25440 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
BRD2P25440 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.34■□□□□ 0.85
BRD2P25440 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.34■□□□□ 0.85
BRD2P25440 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
BRD2P25440 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD2P25440 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD2P25440 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.34■□□□□ 0.85
BRD2P25440 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
BRD2P25440 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.33■□□□□ 0.85
BRD2P25440 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
BRD2P25440 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
BRD2P25440 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BRD2P25440 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BRD2P25440 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD2P25440 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.33■□□□□ 0.85
BRD2P25440 TSPY21P-201ENST00000433481 731 ntBASIC20.33■□□□□ 0.85
BRD2P25440 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.33■□□□□ 0.85
BRD2P25440 NUDT16P1-203ENST00000513809 620 ntBASIC20.33■□□□□ 0.85
BRD2P25440 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.33■□□□□ 0.85
BRD2P25440 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 AC098818.2-201ENST00000564925 2320 ntBASIC20.33■□□□□ 0.84
BRD2P25440 KRT8P11-201ENST00000409686 1436 ntBASIC20.33■□□□□ 0.84
BRD2P25440 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
BRD2P25440 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
BRD2P25440 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
BRD2P25440 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BRD2P25440 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.32■□□□□ 0.84
BRD2P25440 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.32■□□□□ 0.84
BRD2P25440 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.32■□□□□ 0.84
BRD2P25440 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.32■□□□□ 0.84
BRD2P25440 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BRD2P25440 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.32■□□□□ 0.84
BRD2P25440 SNORA78-201ENST00000459373 127 ntBASIC20.32■□□□□ 0.84
BRD2P25440 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.32■□□□□ 0.84
BRD2P25440 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
BRD2P25440 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.32■□□□□ 0.84
BRD2P25440 AC026471.5-201ENST00000615068 467 ntBASIC20.32■□□□□ 0.84
BRD2P25440 AC066615.1-201ENST00000640911 628 ntBASIC20.32■□□□□ 0.84
BRD2P25440 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BRD2P25440 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRD2P25440 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.32■□□□□ 0.84
BRD2P25440 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.32■□□□□ 0.84
BRD2P25440 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BRD2P25440 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms