Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST1H1DP16402 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1DP16402 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1DP16402 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1DP16402 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1DP16402 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1DP16402 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H1DP16402 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HIST1H1DP16402 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1DP16402 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 MIPEPP3-201ENST00000412105 444 ntBASIC16.09■□□□□ 0.17
HIST1H1DP16402 TSPY21P-201ENST00000433481 731 ntBASIC16.09■□□□□ 0.17
HIST1H1DP16402 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.09■□□□□ 0.17
HIST1H1DP16402 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 AL162430.1-201ENST00000480705 870 ntBASIC16.09■□□□□ 0.17
HIST1H1DP16402 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 AC073111.5-205ENST00000641717 521 ntBASIC16.09■□□□□ 0.17
HIST1H1DP16402 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H1DP16402 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1DP16402 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST1H1DP16402 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
HIST1H1DP16402 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.08■□□□□ 0.17
HIST1H1DP16402 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HIST1H1DP16402 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1DP16402 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
HIST1H1DP16402 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 RARRES2P6-201ENST00000567333 442 ntBASIC16.08■□□□□ 0.16
HIST1H1DP16402 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 AC080038.1-201ENST00000611274 1154 ntBASIC16.08■□□□□ 0.16
HIST1H1DP16402 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms