Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFRAP16234 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDGFRAP16234 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.91■□□□□ 0.78
PDGFRAP16234 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.91■□□□□ 0.78
PDGFRAP16234 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.91■□□□□ 0.78
PDGFRAP16234 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PDGFRAP16234 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.91■□□□□ 0.78
PDGFRAP16234 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
PDGFRAP16234 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.91■□□□□ 0.78
PDGFRAP16234 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.91■□□□□ 0.78
PDGFRAP16234 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFRAP16234 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFRAP16234 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFRAP16234 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.91■□□□□ 0.78
PDGFRAP16234 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDGFRAP16234 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFRAP16234 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.9■□□□□ 0.78
PDGFRAP16234 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PDGFRAP16234 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PDGFRAP16234 BX088651.1-201ENST00000540551 451 ntBASIC19.9■□□□□ 0.78
PDGFRAP16234 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.9■□□□□ 0.78
PDGFRAP16234 AP000692.2-201ENST00000608391 879 ntBASIC19.9■□□□□ 0.78
PDGFRAP16234 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.9■□□□□ 0.78
PDGFRAP16234 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.9■□□□□ 0.78
PDGFRAP16234 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PDGFRAP16234 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDGFRAP16234 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.9■□□□□ 0.78
PDGFRAP16234 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFRAP16234 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDGFRAP16234 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFRAP16234 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDGFRAP16234 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFRAP16234 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFRAP16234 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
PDGFRAP16234 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFRAP16234 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFRAP16234 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 CKBP1-201ENST00000565489 1086 ntBASIC19.89■□□□□ 0.77
PDGFRAP16234 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PDGFRAP16234 AC004408.2-201ENST00000623613 2777 ntBASIC19.89■□□□□ 0.77
PDGFRAP16234 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
PDGFRAP16234 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFRAP16234 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PDGFRAP16234 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.88■□□□□ 0.77
PDGFRAP16234 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PDGFRAP16234 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.88■□□□□ 0.77
PDGFRAP16234 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.88■□□□□ 0.77
PDGFRAP16234 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.88■□□□□ 0.77
PDGFRAP16234 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.88■□□□□ 0.77
PDGFRAP16234 AC073912.3-201ENST00000624414 853 ntBASIC19.88■□□□□ 0.77
PDGFRAP16234 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PDGFRAP16234 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFRAP16234 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
PDGFRAP16234 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDGFRAP16234 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms