Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 KRT8P41-201ENST00000533985 1514 ntBASIC17.53■□□□□ 0.4
UBL4AP11441 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
UBL4AP11441 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.53■□□□□ 0.4
UBL4AP11441 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.53■□□□□ 0.4
UBL4AP11441 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.53■□□□□ 0.4
UBL4AP11441 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.53■□□□□ 0.4
UBL4AP11441 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
UBL4AP11441 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 IRX1P1-201ENST00000438849 1838 ntBASIC17.53■□□□□ 0.4
UBL4AP11441 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.53■□□□□ 0.4
UBL4AP11441 FP475955.4-201ENST00000623131 1990 ntBASIC17.53■□□□□ 0.4
UBL4AP11441 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
UBL4AP11441 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
UBL4AP11441 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
UBL4AP11441 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.52■□□□□ 0.4
UBL4AP11441 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
UBL4AP11441 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBL4AP11441 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.52■□□□□ 0.4
UBL4AP11441 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
UBL4AP11441 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.52■□□□□ 0.4
UBL4AP11441 AC026271.3-201ENST00000571884 352 ntBASIC17.52■□□□□ 0.4
UBL4AP11441 TMEM191A-211ENST00000637163 1067 ntBASIC17.52■□□□□ 0.4
UBL4AP11441 AL031985.4-201ENST00000642138 673 ntBASIC17.52■□□□□ 0.4
UBL4AP11441 NEFHP1-201ENST00000412845 2629 ntBASIC17.52■□□□□ 0.4
UBL4AP11441 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBL4AP11441 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.52■□□□□ 0.4
UBL4AP11441 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.52■□□□□ 0.39
UBL4AP11441 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.52■□□□□ 0.39
UBL4AP11441 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
UBL4AP11441 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBL4AP11441 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.51■□□□□ 0.39
UBL4AP11441 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UBL4AP11441 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 TSPY23P-201ENST00000440136 739 ntBASIC17.51■□□□□ 0.39
UBL4AP11441 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.51■□□□□ 0.39
UBL4AP11441 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UBL4AP11441 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms