Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLTAP09496 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.74■□□□□ 0.91
CLTAP09496 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLTAP09496 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.73■□□□□ 0.91
CLTAP09496 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLTAP09496 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.73■□□□□ 0.91
CLTAP09496 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.73■□□□□ 0.91
CLTAP09496 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.73■□□□□ 0.91
CLTAP09496 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.73■□□□□ 0.91
CLTAP09496 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.73■□□□□ 0.91
CLTAP09496 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLTAP09496 AC116562.4-202ENST00000641738 218 ntBASIC20.73■□□□□ 0.91
CLTAP09496 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLTAP09496 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLTAP09496 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLTAP09496 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLTAP09496 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.72■□□□□ 0.91
CLTAP09496 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.72■□□□□ 0.91
CLTAP09496 CCR12P-201ENST00000446203 998 ntBASIC20.72■□□□□ 0.91
CLTAP09496 AL023803.3-201ENST00000615559 522 ntBASIC20.72■□□□□ 0.91
CLTAP09496 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.72■□□□□ 0.91
CLTAP09496 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLTAP09496 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLTAP09496 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.71■□□□□ 0.91
CLTAP09496 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLTAP09496 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLTAP09496 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 AC128688.1-201ENST00000487626 519 ntBASIC20.71■□□□□ 0.91
CLTAP09496 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CLTAP09496 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLTAP09496 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.71■□□□□ 0.91
CLTAP09496 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLTAP09496 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTAP09496 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTAP09496 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLTAP09496 TEX21P-204ENST00000641479 1693 ntBASIC20.7■□□□□ 0.91
CLTAP09496 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLTAP09496 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.7■□□□□ 0.9
CLTAP09496 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 TSPY17P-201ENST00000450329 467 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms