Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TPM2P07951 PCDHA12-202ENST00000613593 2588 ntBASIC21.55■■□□□ 1.04
TPM2P07951 AC046158.3-201ENST00000624947 2558 ntBASIC21.55■■□□□ 1.04
TPM2P07951 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.55■■□□□ 1.04
TPM2P07951 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
TPM2P07951 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.55■■□□□ 1.04
TPM2P07951 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM2P07951 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TPM2P07951 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.54■■□□□ 1.04
TPM2P07951 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
TPM2P07951 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TPM2P07951 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TPM2P07951 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM2P07951 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
TPM2P07951 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 AC093787.1-201ENST00000450396 207 ntBASIC21.54■■□□□ 1.04
TPM2P07951 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.54■■□□□ 1.04
TPM2P07951 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TPM2P07951 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.54■■□□□ 1.04
TPM2P07951 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TPM2P07951 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM2P07951 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.54■■□□□ 1.04
TPM2P07951 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM2P07951 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.53■■□□□ 1.04
TPM2P07951 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.53■■□□□ 1.04
TPM2P07951 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
TPM2P07951 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.53■■□□□ 1.04
TPM2P07951 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TPM2P07951 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.53■■□□□ 1.04
TPM2P07951 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.53■■□□□ 1.04
TPM2P07951 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM2P07951 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TPM2P07951 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TPM2P07951 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TPM2P07951 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.52■■□□□ 1.04
TPM2P07951 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM2P07951 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TPM2P07951 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM2P07951 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.52■■□□□ 1.04
TPM2P07951 AL162430.1-201ENST00000480705 870 ntBASIC21.52■■□□□ 1.04
TPM2P07951 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TPM2P07951 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TPM2P07951 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM2P07951 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TPM2P07951 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TPM2P07951 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM2P07951 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
TPM2P07951 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.52■■□□□ 1.03
TPM2P07951 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms