Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN1P07384 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CAPN1P07384 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAPN1P07384 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN1P07384 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 FAM197Y1-201ENST00000421178 764 ntBASIC18.66■□□□□ 0.58
CAPN1P07384 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN1P07384 AP003071.4-201ENST00000562276 1284 ntBASIC18.66■□□□□ 0.58
CAPN1P07384 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CAPN1P07384 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN1P07384 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN1P07384 AC073195.1-201ENST00000607241 877 ntBASIC18.66■□□□□ 0.58
CAPN1P07384 AL353708.3-201ENST00000610272 989 ntBASIC18.66■□□□□ 0.58
CAPN1P07384 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN1P07384 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
CAPN1P07384 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN1P07384 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN1P07384 AC006333.2-201ENST00000607957 2099 ntBASIC18.65■□□□□ 0.58
CAPN1P07384 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CAPN1P07384 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 CROCCP3-202ENST00000420820 1947 ntBASIC18.65■□□□□ 0.58
CAPN1P07384 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CAPN1P07384 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.65■□□□□ 0.58
CAPN1P07384 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 AC087499.1-201ENST00000418141 1075 ntBASIC18.65■□□□□ 0.58
CAPN1P07384 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 LINC01023-201ENST00000606054 436 ntBASIC18.65■□□□□ 0.58
CAPN1P07384 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN1P07384 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN1P07384 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CAPN1P07384 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CAPN1P07384 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN1P07384 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN1P07384 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN1P07384 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CAPN1P07384 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CAPN1P07384 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN1P07384 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CAPN1P07384 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CAPN1P07384 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPN1P07384 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPN1P07384 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CAPN1P07384 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN1P07384 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms