Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TPM3P06753 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TPM3P06753 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TPM3P06753 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
TPM3P06753 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.26■□□□□ 0.99
TPM3P06753 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.26■□□□□ 0.99
TPM3P06753 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.26■□□□□ 0.99
TPM3P06753 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.26■□□□□ 0.99
TPM3P06753 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 AC011767.1-201ENST00000617410 1153 ntBASIC21.26■□□□□ 0.99
TPM3P06753 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.26■□□□□ 0.99
TPM3P06753 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TPM3P06753 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TPM3P06753 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM3P06753 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TPM3P06753 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM3P06753 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 KRT17P1-201ENST00000399211 1546 ntBASIC21.25■□□□□ 0.99
TPM3P06753 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TPM3P06753 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TPM3P06753 AL390719.1-204ENST00000412397 1219 ntBASIC21.25■□□□□ 0.99
TPM3P06753 AL512625.2-201ENST00000417533 625 ntBASIC21.25■□□□□ 0.99
TPM3P06753 AC007322.1-201ENST00000426983 750 ntBASIC21.25■□□□□ 0.99
TPM3P06753 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM3P06753 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM3P06753 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.25■□□□□ 0.99
TPM3P06753 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TPM3P06753 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TPM3P06753 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM3P06753 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.25■□□□□ 0.99
TPM3P06753 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM3P06753 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.24■□□□□ 0.99
TPM3P06753 LSM12P1-201ENST00000411836 588 ntBASIC21.24■□□□□ 0.99
TPM3P06753 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.24■□□□□ 0.99
TPM3P06753 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.24■□□□□ 0.99
TPM3P06753 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 BID-214ENST00000617586 542 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TPM3P06753 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM3P06753 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.24■□□□□ 0.99
TPM3P06753 AC008764.6-201ENST00000595909 2069 ntBASIC21.24■□□□□ 0.99
TPM3P06753 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
TPM3P06753 ANO7L1-203ENST00000602586 1720 ntBASIC21.24■□□□□ 0.99
TPM3P06753 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
TPM3P06753 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM3P06753 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms