Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZBED1O96006 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ZBED1O96006 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.04■□□□□ 0.8
ZBED1O96006 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.04■□□□□ 0.8
ZBED1O96006 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZBED1O96006 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZBED1O96006 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.04■□□□□ 0.8
ZBED1O96006 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZBED1O96006 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.03■□□□□ 0.8
ZBED1O96006 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
ZBED1O96006 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.03■□□□□ 0.8
ZBED1O96006 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.03■□□□□ 0.8
ZBED1O96006 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.03■□□□□ 0.8
ZBED1O96006 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.03■□□□□ 0.8
ZBED1O96006 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.03■□□□□ 0.8
ZBED1O96006 C2orf69P3-201ENST00000565542 1120 ntBASIC20.03■□□□□ 0.8
ZBED1O96006 AC010947.1-201ENST00000623454 693 ntBASIC20.03■□□□□ 0.8
ZBED1O96006 AC133561.5-201ENST00000635547 218 ntBASIC20.03■□□□□ 0.8
ZBED1O96006 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.03■□□□□ 0.8
ZBED1O96006 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.03■□□□□ 0.8
ZBED1O96006 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZBED1O96006 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.03■□□□□ 0.8
ZBED1O96006 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZBED1O96006 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.02■□□□□ 0.8
ZBED1O96006 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.02■□□□□ 0.8
ZBED1O96006 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.02■□□□□ 0.8
ZBED1O96006 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
ZBED1O96006 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.02■□□□□ 0.8
ZBED1O96006 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ZBED1O96006 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZBED1O96006 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ZBED1O96006 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZBED1O96006 AC141586.3-201ENST00000562166 1838 ntBASIC20.02■□□□□ 0.79
ZBED1O96006 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZBED1O96006 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZBED1O96006 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.01■□□□□ 0.79
ZBED1O96006 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZBED1O96006 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.01■□□□□ 0.79
ZBED1O96006 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
ZBED1O96006 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZBED1O96006 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZBED1O96006 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZBED1O96006 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
ZBED1O96006 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZBED1O96006 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20■□□□□ 0.79
ZBED1O96006 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
ZBED1O96006 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZBED1O96006 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20■□□□□ 0.79
ZBED1O96006 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms