Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 AC073592.3-201ENST00000625118 1834 ntBASIC13.78□□□□□ -0.2
TNFRSF6BO95407 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 YBX1P1-201ENST00000445822 960 ntBASIC13.78□□□□□ -0.2
TNFRSF6BO95407 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 AC083906.6-201ENST00000641366 219 ntBASIC13.78□□□□□ -0.2
TNFRSF6BO95407 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 AC004854.2-201ENST00000608450 1441 ntBASIC13.78□□□□□ -0.2
TNFRSF6BO95407 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 PRORSD1P-202ENST00000563365 2154 ntBASIC13.78□□□□□ -0.2
TNFRSF6BO95407 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TNFRSF6BO95407 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TNFRSF6BO95407 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
TNFRSF6BO95407 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TNFRSF6BO95407 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TNFRSF6BO95407 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TNFRSF6BO95407 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 KRT18P68-201ENST00000392293 1000 ntBASIC13.77□□□□□ -0.21
TNFRSF6BO95407 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 AC104417.2-201ENST00000562989 1793 ntBASIC13.77□□□□□ -0.21
TNFRSF6BO95407 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 AL031432.3-201ENST00000607698 485 ntBASIC13.77□□□□□ -0.21
TNFRSF6BO95407 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 MYCNOS-205ENST00000641950 531 ntBASIC13.77□□□□□ -0.21
TNFRSF6BO95407 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFRSF6BO95407 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 ESPNP-201ENST00000270691 2015 ntBASIC13.76□□□□□ -0.21
TNFRSF6BO95407 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 FEM1AP3-201ENST00000403722 1741 ntBASIC13.76□□□□□ -0.21
TNFRSF6BO95407 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFRSF6BO95407 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms