Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLSTN1O94985 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.98■□□□□ 0.95
CLSTN1O94985 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLSTN1O94985 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.98■□□□□ 0.95
CLSTN1O94985 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.98■□□□□ 0.95
CLSTN1O94985 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 AC133681.1-201ENST00000465482 601 ntBASIC20.98■□□□□ 0.95
CLSTN1O94985 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.98■□□□□ 0.95
CLSTN1O94985 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.98■□□□□ 0.95
CLSTN1O94985 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLSTN1O94985 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CLSTN1O94985 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.97■□□□□ 0.95
CLSTN1O94985 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.97■□□□□ 0.95
CLSTN1O94985 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.97■□□□□ 0.95
CLSTN1O94985 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.97■□□□□ 0.95
CLSTN1O94985 UBE2SP1-201ENST00000450587 669 ntBASIC20.97■□□□□ 0.95
CLSTN1O94985 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CLSTN1O94985 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.97■□□□□ 0.95
CLSTN1O94985 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.97■□□□□ 0.95
CLSTN1O94985 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.97■□□□□ 0.95
CLSTN1O94985 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.97■□□□□ 0.95
CLSTN1O94985 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLSTN1O94985 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CLSTN1O94985 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CLSTN1O94985 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.96■□□□□ 0.95
CLSTN1O94985 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.96■□□□□ 0.95
CLSTN1O94985 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.96■□□□□ 0.95
CLSTN1O94985 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.96■□□□□ 0.95
CLSTN1O94985 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.96■□□□□ 0.95
CLSTN1O94985 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.96■□□□□ 0.95
CLSTN1O94985 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.96■□□□□ 0.95
CLSTN1O94985 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLSTN1O94985 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CLSTN1O94985 AC004408.2-201ENST00000623613 2777 ntBASIC20.96■□□□□ 0.95
CLSTN1O94985 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.96■□□□□ 0.95
CLSTN1O94985 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
CLSTN1O94985 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLSTN1O94985 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.95■□□□□ 0.95
CLSTN1O94985 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.95■□□□□ 0.94
CLSTN1O94985 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.95■□□□□ 0.94
CLSTN1O94985 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.95■□□□□ 0.94
CLSTN1O94985 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.95■□□□□ 0.94
CLSTN1O94985 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.95■□□□□ 0.94
CLSTN1O94985 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.95■□□□□ 0.94
CLSTN1O94985 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.95■□□□□ 0.94
CLSTN1O94985 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.95■□□□□ 0.94
CLSTN1O94985 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLSTN1O94985 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.95■□□□□ 0.94
CLSTN1O94985 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLSTN1O94985 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms