Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.06■■□□□ 1.12
CDKL5O76039 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.06■■□□□ 1.12
CDKL5O76039 AC113410.3-201ENST00000623366 203 ntBASIC22.06■■□□□ 1.12
CDKL5O76039 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CDKL5O76039 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.06■■□□□ 1.12
CDKL5O76039 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
CDKL5O76039 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CDKL5O76039 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CDKL5O76039 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKL5O76039 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDKL5O76039 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDKL5O76039 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDKL5O76039 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.05■■□□□ 1.12
CDKL5O76039 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDKL5O76039 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.05■■□□□ 1.12
CDKL5O76039 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 MESTP1-201ENST00000404287 994 ntBASIC22.05■■□□□ 1.12
CDKL5O76039 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.05■■□□□ 1.12
CDKL5O76039 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.05■■□□□ 1.12
CDKL5O76039 AP000692.2-201ENST00000608391 879 ntBASIC22.05■■□□□ 1.12
CDKL5O76039 DGCR10-201ENST00000609839 495 ntBASIC22.05■■□□□ 1.12
CDKL5O76039 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.05■■□□□ 1.12
CDKL5O76039 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CDKL5O76039 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDKL5O76039 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDKL5O76039 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.04■■□□□ 1.12
CDKL5O76039 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.04■■□□□ 1.12
CDKL5O76039 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
CDKL5O76039 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 MIR718-201ENST00000390190 70 ntBASIC22.04■■□□□ 1.12
CDKL5O76039 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
CDKL5O76039 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 AC116562.2-201ENST00000507042 360 ntBASIC22.04■■□□□ 1.12
CDKL5O76039 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.04■■□□□ 1.12
CDKL5O76039 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CDKL5O76039 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKL5O76039 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.04■■□□□ 1.12
CDKL5O76039 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.04■■□□□ 1.12
CDKL5O76039 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDKL5O76039 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDKL5O76039 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDKL5O76039 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.03■■□□□ 1.12
CDKL5O76039 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CDKL5O76039 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.03■■□□□ 1.12
CDKL5O76039 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.03■■□□□ 1.12
CDKL5O76039 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.03■■□□□ 1.12
CDKL5O76039 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.03■■□□□ 1.12
CDKL5O76039 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.03■■□□□ 1.12
CDKL5O76039 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.03■■□□□ 1.12
CDKL5O76039 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDKL5O76039 KRT8P3-201ENST00000519669 1449 ntBASIC22.03■■□□□ 1.12
CDKL5O76039 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDKL5O76039 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDKL5O76039 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.02■■□□□ 1.12
CDKL5O76039 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 Z98044.1-201ENST00000632503 1764 ntBASIC22.02■■□□□ 1.12
CDKL5O76039 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CDKL5O76039 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CDKL5O76039 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 AC008550.1-201ENST00000511500 884 ntBASIC22.02■■□□□ 1.12
CDKL5O76039 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.02■■□□□ 1.12
CDKL5O76039 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CDKL5O76039 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.02■■□□□ 1.12
CDKL5O76039 Z99916.2-201ENST00000604037 246 ntBASIC22.02■■□□□ 1.12
CDKL5O76039 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.02■■□□□ 1.12
CDKL5O76039 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CDKL5O76039 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
CDKL5O76039 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDKL5O76039 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
CDKL5O76039 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.02■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms