Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM3O75382 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 AC090340.1-201ENST00000620778 4980 ntBASIC17.68■□□□□ 0.42
TRIM3O75382 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM3O75382 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM3O75382 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM3O75382 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM3O75382 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 RBM17P1-201ENST00000453646 1190 ntBASIC17.68■□□□□ 0.42
TRIM3O75382 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM3O75382 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM3O75382 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM3O75382 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM3O75382 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM3O75382 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM3O75382 FSCN1P1-201ENST00000568912 1481 ntBASIC17.68■□□□□ 0.42
TRIM3O75382 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM3O75382 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM3O75382 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM3O75382 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM3O75382 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 B3GAT3P1-201ENST00000471720 806 ntBASIC17.67■□□□□ 0.42
TRIM3O75382 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM3O75382 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM3O75382 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM3O75382 MIR6786-201ENST00000616843 113 ntBASIC17.67■□□□□ 0.42
TRIM3O75382 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM3O75382 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM3O75382 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM3O75382 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM3O75382 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM3O75382 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM3O75382 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM3O75382 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 UNC93B2-201ENST00000285383 730 ntBASIC17.66■□□□□ 0.42
TRIM3O75382 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM3O75382 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 AC011506.1-201ENST00000474329 610 ntBASIC17.66■□□□□ 0.42
TRIM3O75382 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM3O75382 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM3O75382 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM3O75382 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM3O75382 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM3O75382 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM3O75382 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM3O75382 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM3O75382 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM3O75382 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 AC079598.2-202ENST00000546624 1451 ntBASIC17.65■□□□□ 0.42
TRIM3O75382 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM3O75382 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM3O75382 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM3O75382 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM3O75382 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM3O75382 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms