Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 PCDHB19P-201ENST00000570871 2371 ntBASIC17.02■□□□□ 0.31
PFDN1O60925 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.02■□□□□ 0.31
PFDN1O60925 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.02■□□□□ 0.31
PFDN1O60925 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN1O60925 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 LONRF2P2-201ENST00000439212 571 ntBASIC17.01■□□□□ 0.31
PFDN1O60925 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 AC009831.1-201ENST00000580420 1582 ntBASIC17.01■□□□□ 0.31
PFDN1O60925 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN1O60925 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN1O60925 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN1O60925 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17■□□□□ 0.31
PFDN1O60925 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 AL365209.1-201ENST00000624418 6473 ntBASIC17■□□□□ 0.31
PFDN1O60925 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 AF131216.4-201ENST00000638924 1588 ntBASIC17■□□□□ 0.31
PFDN1O60925 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 AL512353.2-201ENST00000448759 1962 ntBASIC17■□□□□ 0.31
PFDN1O60925 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17■□□□□ 0.31
PFDN1O60925 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17■□□□□ 0.31
PFDN1O60925 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17■□□□□ 0.31
PFDN1O60925 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN1O60925 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PFDN1O60925 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.99■□□□□ 0.31
PFDN1O60925 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PFDN1O60925 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.99■□□□□ 0.31
PFDN1O60925 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.99■□□□□ 0.31
PFDN1O60925 AC016575.1-201ENST00000607026 382 ntBASIC16.99■□□□□ 0.31
PFDN1O60925 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.99■□□□□ 0.31
PFDN1O60925 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.99■□□□□ 0.31
PFDN1O60925 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms