Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 AL355355.2-201ENST00000442321 338 ntBASIC16.91■□□□□ 0.3
TRAF3IP2O43734 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP2O43734 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 TSPY7P-201ENST00000431358 1114 ntBASIC16.9■□□□□ 0.3
TRAF3IP2O43734 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP2O43734 AC096733.2-201ENST00000609937 1394 ntBASIC16.89■□□□□ 0.3
TRAF3IP2O43734 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAF3IP2O43734 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 AP003071.4-201ENST00000562276 1284 ntBASIC16.89■□□□□ 0.29
TRAF3IP2O43734 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 AC066615.1-201ENST00000640911 628 ntBASIC16.89■□□□□ 0.29
TRAF3IP2O43734 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP2O43734 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 CROCCP3-202ENST00000420820 1947 ntBASIC16.88■□□□□ 0.29
TRAF3IP2O43734 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 SNORA78-201ENST00000459373 127 ntBASIC16.88■□□□□ 0.29
TRAF3IP2O43734 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 MIR4785-201ENST00000585005 73 ntBASIC16.88■□□□□ 0.29
TRAF3IP2O43734 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 AC093503.3-201ENST00000624917 2352 ntBASIC16.88■□□□□ 0.29
TRAF3IP2O43734 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms