Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.48■□□□□ 0.55
HDAC3O15379 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
HDAC3O15379 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.47■□□□□ 0.55
HDAC3O15379 AC126763.1-201ENST00000552015 2118 ntBASIC18.47■□□□□ 0.55
HDAC3O15379 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HDAC3O15379 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HDAC3O15379 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HDAC3O15379 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HDAC3O15379 MIPEPP3-201ENST00000412105 444 ntBASIC18.47■□□□□ 0.55
HDAC3O15379 AL162430.1-201ENST00000480705 870 ntBASIC18.47■□□□□ 0.55
HDAC3O15379 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.47■□□□□ 0.55
HDAC3O15379 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.47■□□□□ 0.55
HDAC3O15379 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HDAC3O15379 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HDAC3O15379 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.47■□□□□ 0.55
HDAC3O15379 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.47■□□□□ 0.55
HDAC3O15379 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.47■□□□□ 0.55
HDAC3O15379 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HDAC3O15379 AL162741.1-201ENST00000565563 1558 ntBASIC18.47■□□□□ 0.55
HDAC3O15379 AC090340.1-201ENST00000620778 4980 ntBASIC18.47■□□□□ 0.55
HDAC3O15379 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.46■□□□□ 0.55
HDAC3O15379 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HDAC3O15379 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.46■□□□□ 0.55
HDAC3O15379 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.46■□□□□ 0.55
HDAC3O15379 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.46■□□□□ 0.55
HDAC3O15379 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.46■□□□□ 0.55
HDAC3O15379 AC080038.1-201ENST00000611274 1154 ntBASIC18.46■□□□□ 0.55
HDAC3O15379 AC073111.5-205ENST00000641717 521 ntBASIC18.46■□□□□ 0.55
HDAC3O15379 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.46■□□□□ 0.55
HDAC3O15379 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HDAC3O15379 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.46■□□□□ 0.55
HDAC3O15379 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC3O15379 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.46■□□□□ 0.55
HDAC3O15379 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
HDAC3O15379 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HDAC3O15379 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HDAC3O15379 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.46■□□□□ 0.54
HDAC3O15379 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HDAC3O15379 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.45■□□□□ 0.54
HDAC3O15379 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
HDAC3O15379 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC3O15379 AC091874.3-201ENST00000512672 1195 ntBASIC18.45■□□□□ 0.54
HDAC3O15379 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC3O15379 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.45■□□□□ 0.54
HDAC3O15379 AC022517.1-201ENST00000592429 346 ntBASIC18.45■□□□□ 0.54
HDAC3O15379 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 AC092118.2-201ENST00000613495 667 ntBASIC18.45■□□□□ 0.54
HDAC3O15379 AL121829.2-201ENST00000620908 328 ntBASIC18.45■□□□□ 0.54
HDAC3O15379 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.45■□□□□ 0.54
HDAC3O15379 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
HDAC3O15379 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.45■□□□□ 0.54
HDAC3O15379 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC3O15379 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HDAC3O15379 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.45■□□□□ 0.54
HDAC3O15379 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC3O15379 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC3O15379 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
HDAC3O15379 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 AC092368.3-202ENST00000574180 1591 ntBASIC18.44■□□□□ 0.54
HDAC3O15379 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.44■□□□□ 0.54
HDAC3O15379 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms